Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.6■□□□□ 0.25
Cfap54Q8C6S9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap54Q8C6S9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap54Q8C6S9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap54Q8C6S9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Gm11452-201ENSMUST00000122376 690 ntBASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap54Q8C6S9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cfap54Q8C6S9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cfap54Q8C6S9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cfap54Q8C6S9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cfap54Q8C6S9 Gm11594-201ENSMUST00000122313 162 ntBASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Cfap54Q8C6S9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Gm10060-201ENSMUST00000212002 111 ntBASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cfap54Q8C6S9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cfap54Q8C6S9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap54Q8C6S9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap54Q8C6S9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap54Q8C6S9 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.54■□□□□ 0.24
Cfap54Q8C6S9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap54Q8C6S9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap54Q8C6S9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap54Q8C6S9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cfap54Q8C6S9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap54Q8C6S9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms