Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Suds3Q8BR65 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.74■□□□□ 0.43
Suds3Q8BR65 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.73■□□□□ 0.43
Suds3Q8BR65 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Gm13158-201ENSMUST00000122007 736 ntBASIC17.73■□□□□ 0.43
Suds3Q8BR65 Gm18666-201ENSMUST00000190039 958 ntBASIC17.73■□□□□ 0.43
Suds3Q8BR65 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.73■□□□□ 0.43
Suds3Q8BR65 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.73■□□□□ 0.43
Suds3Q8BR65 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.73■□□□□ 0.43
Suds3Q8BR65 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Suds3Q8BR65 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Gm10252-201ENSMUST00000209541 832 ntBASIC17.72■□□□□ 0.43
Suds3Q8BR65 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Suds3Q8BR65 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.71■□□□□ 0.43
Suds3Q8BR65 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms