Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Gm15372-201ENSMUST00000120729 834 ntBASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Gm13186-201ENSMUST00000118031 316 ntBASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC22.75■■□□□ 1.23
Col16a1Q8BLX7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Gm18733-201ENSMUST00000173950 856 ntBASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col16a1Q8BLX7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col16a1Q8BLX7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col16a1Q8BLX7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col16a1Q8BLX7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC22.73■■□□□ 1.23
Col16a1Q8BLX7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Col16a1Q8BLX7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC22.73■■□□□ 1.23
Col16a1Q8BLX7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Col16a1Q8BLX7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Col16a1Q8BLX7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Col16a1Q8BLX7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col16a1Q8BLX7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col16a1Q8BLX7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col16a1Q8BLX7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col16a1Q8BLX7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col16a1Q8BLX7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col16a1Q8BLX7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col16a1Q8BLX7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col16a1Q8BLX7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col16a1Q8BLX7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Col16a1Q8BLX7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 Gm11452-201ENSMUST00000122376 690 ntBASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC22.7■■□□□ 1.22
Col16a1Q8BLX7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col16a1Q8BLX7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms