Protein–RNA interactions for Protein: Q8BH75

Rnf41, E3 ubiquitin-protein ligase NRDP1, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41Q8BH75 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf41Q8BH75 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf41Q8BH75 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf41Q8BH75 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf41Q8BH75 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.27■□□□□ 0.84
Rnf41Q8BH75 Il3ra-202ENSMUST00000223589 738 ntBASIC20.27■□□□□ 0.84
Rnf41Q8BH75 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf41Q8BH75 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf41Q8BH75 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf41Q8BH75 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Rnf41Q8BH75 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Gm11539-201ENSMUST00000119837 557 ntBASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Gm13436-201ENSMUST00000120418 567 ntBASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rnf41Q8BH75 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.26■□□□□ 0.83
Rnf41Q8BH75 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Gm7791-201ENSMUST00000219066 539 ntBASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf41Q8BH75 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Gm13559-201ENSMUST00000120476 863 ntBASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Gm43799-201ENSMUST00000201845 579 ntBASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.24■□□□□ 0.83
Rnf41Q8BH75 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf41Q8BH75 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.22■□□□□ 0.83
Rnf41Q8BH75 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf41Q8BH75 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms