Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Gm10252-201ENSMUST00000209541 832 ntBASIC17.05■□□□□ 0.32
Ubp1Q811S7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.05■□□□□ 0.32
Ubp1Q811S7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.04■□□□□ 0.32
Ubp1Q811S7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Mir8112-201ENSMUST00000184382 131 ntBASIC17.04■□□□□ 0.32
Ubp1Q811S7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubp1Q811S7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.03■□□□□ 0.32
Ubp1Q811S7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubp1Q811S7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.02■□□□□ 0.32
Ubp1Q811S7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubp1Q811S7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ubp1Q811S7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubp1Q811S7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubp1Q811S7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ubp1Q811S7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubp1Q811S7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Ubp1Q811S7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Mir5122-201ENSMUST00000175004 89 ntBASIC17.01■□□□□ 0.31
Ubp1Q811S7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Gm44487-201ENSMUST00000205145 325 ntBASIC17.01■□□□□ 0.31
Ubp1Q811S7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.01■□□□□ 0.31
Ubp1Q811S7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubp1Q811S7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms