Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.45■□□□□ 0.54
Rnf168Q80XJ2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf168Q80XJ2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Gm7367-201ENSMUST00000057611 492 ntBASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Idnk-204ENSMUST00000226010 1898 ntBASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rnf168Q80XJ2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf168Q80XJ2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf168Q80XJ2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf168Q80XJ2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf168Q80XJ2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf168Q80XJ2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf168Q80XJ2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms