Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Csmd3Q80T79 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.86□□□□□ -0.51
Csmd3Q80T79 Gm37025-201ENSMUST00000195159 829 ntBASIC11.86□□□□□ -0.51
Csmd3Q80T79 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Csmd3Q80T79 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.86□□□□□ -0.51
Csmd3Q80T79 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.86□□□□□ -0.51
Csmd3Q80T79 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.85□□□□□ -0.51
Csmd3Q80T79 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Csmd3Q80T79 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.84□□□□□ -0.51
Csmd3Q80T79 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Gm5364-201ENSMUST00000216789 889 ntBASIC11.84□□□□□ -0.51
Csmd3Q80T79 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.84□□□□□ -0.51
Csmd3Q80T79 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csmd3Q80T79 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.84□□□□□ -0.51
Csmd3Q80T79 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Gm23935-201ENSMUST00000102303 57 ntBASIC11.83□□□□□ -0.52
Csmd3Q80T79 Gm24270-201ENSMUST00000102326 57 ntBASIC11.83□□□□□ -0.52
Csmd3Q80T79 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Gm24245-201ENSMUST00000157318 57 ntBASIC11.83□□□□□ -0.52
Csmd3Q80T79 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC11.83□□□□□ -0.52
Csmd3Q80T79 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Mir5131-201ENSMUST00000175426 93 ntBASIC11.83□□□□□ -0.52
Csmd3Q80T79 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csmd3Q80T79 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms