Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Gm12895-201ENSMUST00000122214 226 ntBASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nup188Q6ZQH8 Phf7-203ENSMUST00000226565 1971 ntBASIC20.58■□□□□ 0.89
Nup188Q6ZQH8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup188Q6ZQH8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup188Q6ZQH8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup188Q6ZQH8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Nup188Q6ZQH8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.58■□□□□ 0.88
Nup188Q6ZQH8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nup188Q6ZQH8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.58■□□□□ 0.88
Nup188Q6ZQH8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Nup188Q6ZQH8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nup188Q6ZQH8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup188Q6ZQH8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 Iqck-206ENSMUST00000208658 2891 ntBASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nup188Q6ZQH8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Fst-202ENSMUST00000223640 2612 ntBASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Gm44450-201ENSMUST00000199528 114 ntBASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup188Q6ZQH8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup188Q6ZQH8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup188Q6ZQH8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup188Q6ZQH8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nup188Q6ZQH8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.53■□□□□ 0.88
Nup188Q6ZQH8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.53■□□□□ 0.88
Nup188Q6ZQH8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup188Q6ZQH8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nup188Q6ZQH8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.52■□□□□ 0.88
Nup188Q6ZQH8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.52■□□□□ 0.88
Nup188Q6ZQH8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nup188Q6ZQH8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup188Q6ZQH8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup188Q6ZQH8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup188Q6ZQH8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nup188Q6ZQH8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup188Q6ZQH8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nup188Q6ZQH8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nup188Q6ZQH8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup188Q6ZQH8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms