Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf220Q6PDX6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf220Q6PDX6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf220Q6PDX6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf220Q6PDX6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf220Q6PDX6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf220Q6PDX6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf220Q6PDX6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf220Q6PDX6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf220Q6PDX6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf220Q6PDX6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Gm13216-201ENSMUST00000117145 591 ntBASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf220Q6PDX6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Gm38205-201ENSMUST00000192243 258 ntBASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Rnf220Q6PDX6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.39■□□□□ 0.22
Rnf220Q6PDX6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Rnf220Q6PDX6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf220Q6PDX6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf220Q6PDX6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms