Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 Mir6982-201ENSMUST00000184354 68 ntBASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc2Q6PDG5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc2Q6PDG5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.18■□□□□ 0.82
Smarcc2Q6PDG5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc2Q6PDG5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcc2Q6PDG5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Smarcc2Q6PDG5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms