Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Gm17807-201ENSMUST00000186869 298 ntBASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Gm43514-201ENSMUST00000198852 424 ntBASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim37Q6PCX9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim37Q6PCX9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim37Q6PCX9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim37Q6PCX9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim37Q6PCX9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms