Protein–RNA interactions for Protein: Q6IQX7

Chpf, Chondroitin sulfate synthase 2, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChpfQ6IQX7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Gm11950-201ENSMUST00000121615 838 ntBASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
ChpfQ6IQX7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Gm18958-201ENSMUST00000174258 762 ntBASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Actl10-202ENSMUST00000226583 1501 ntBASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ChpfQ6IQX7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ChpfQ6IQX7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ChpfQ6IQX7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ChpfQ6IQX7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ChpfQ6IQX7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
ChpfQ6IQX7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
ChpfQ6IQX7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ChpfQ6IQX7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.52■□□□□ 0.55
ChpfQ6IQX7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ChpfQ6IQX7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Gm28033-201ENSMUST00000184224 96 ntBASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ChpfQ6IQX7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ChpfQ6IQX7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ChpfQ6IQX7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ChpfQ6IQX7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ChpfQ6IQX7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.48■□□□□ 0.55
ChpfQ6IQX7 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.48■□□□□ 0.55
ChpfQ6IQX7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ChpfQ6IQX7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
ChpfQ6IQX7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms