Protein–RNA interactions for Protein: Q6B2U8

TDA8, Topoisomerase I damage affected protein 8, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA8Q6B2U8 YJL120WYJL120W 324 nt0.12□□□□□ -2.39
TDA8Q6B2U8 RPS25BYLR333C 327 nt0.12□□□□□ -2.39
TDA8Q6B2U8 SGF11YPL047W 300 nt0.11□□□□□ -2.39
TDA8Q6B2U8 YOR345CYOR345C 351 nt0.1□□□□□ -2.39
TDA8Q6B2U8 snR190snR190 190 nt0.1□□□□□ -2.39
TDA8Q6B2U8 TRS65YGR166W 1683 nt0.1□□□□□ -2.39
TDA8Q6B2U8 YDL185C-AYDL185C-A 228 nt0.09□□□□□ -2.4
TDA8Q6B2U8 YLR434CYLR434C 384 nt0.09□□□□□ -2.4
TDA8Q6B2U8 VPS20YMR077C 666 nt0.09□□□□□ -2.4
TDA8Q6B2U8 BIR1YJR089W 2865 nt0.08□□□□□ -2.4
TDA8Q6B2U8 YMR307C-AYMR307C-A 195 nt0.08□□□□□ -2.4
TDA8Q6B2U8 YCR018C-AYCR018C-A 255 nt0.07□□□□□ -2.4
TDA8Q6B2U8 YDR371C-AYDR371C-A 105 nt0.07□□□□□ -2.4
TDA8Q6B2U8 RCO1YMR075W 2055 nt0.06□□□□□ -2.4
TDA8Q6B2U8 ORC3YLL004W 1851 nt0.06□□□□□ -2.4
TDA8Q6B2U8 YOR029WYOR029W 336 nt0.06□□□□□ -2.4
TDA8Q6B2U8 NNF2YGR089W 2811 nt0.06□□□□□ -2.4
TDA8Q6B2U8 RPS26AYGL189C 360 nt0.05□□□□□ -2.4
TDA8Q6B2U8 COX12YLR038C 252 nt0.05□□□□□ -2.4
TDA8Q6B2U8 YHR007C-AYHR007C-A 216 nt0.04□□□□□ -2.4
TDA8Q6B2U8 YJL007CYJL007C 315 nt0.04□□□□□ -2.4
TDA8Q6B2U8 YKL063CYKL063C 504 nt0.04□□□□□ -2.4
TDA8Q6B2U8 YLR406C-AYLR406C-A 150 nt0.04□□□□□ -2.4
TDA8Q6B2U8 tN(GUU)QtN(GUU)Q 71 nt0.03□□□□□ -2.4
TDA8Q6B2U8 YHR138CYHR138C 345 nt0.03□□□□□ -2.4
TDA8Q6B2U8 YAR029WYAR029W 225 nt0.03□□□□□ -2.4
TDA8Q6B2U8 YNL146WYNL146W 303 nt0.03□□□□□ -2.4
TDA8Q6B2U8 RPS30BYOR182C 192 nt0.03□□□□□ -2.4
TDA8Q6B2U8 LEE1YPL054W 906 nt0.03□□□□□ -2.4
TDA8Q6B2U8 AI1Q0050 2505 nt0.03□□□□□ -2.41
TDA8Q6B2U8 CSN9YDR179C 489 nt0.02□□□□□ -2.41
TDA8Q6B2U8 YOR186C-AYOR186C-A 210 nt0.02□□□□□ -2.41
TDA8Q6B2U8 NIP1YMR309C 2439 nt0.01□□□□□ -2.41
TDA8Q6B2U8 YCR022CYCR022C 345 nt-0.01□□□□□ -2.41
TDA8Q6B2U8 YKL145W-AYKL145W-A 93 nt-0.03□□□□□ -2.41
TDA8Q6B2U8 YLR202CYLR202C 327 nt-0.03□□□□□ -2.41
TDA8Q6B2U8 STE5YDR103W 2754 nt-0.04□□□□□ -2.42
TDA8Q6B2U8 YKL136WYKL136W 399 nt-0.04□□□□□ -2.42
TDA8Q6B2U8 YLR282CYLR282C 342 nt-0.04□□□□□ -2.42
TDA8Q6B2U8 YBL100W-BYBL100W-B 5313 nt-0.04□□□□□ -2.42
TDA8Q6B2U8 ULI1YFR026C 510 nt-0.05□□□□□ -2.42
TDA8Q6B2U8 YPR092WYPR092W 306 nt-0.05□□□□□ -2.42
TDA8Q6B2U8 BUL2YML111W 2763 nt-0.06□□□□□ -2.42
TDA8Q6B2U8 YDR354C-AYDR354C-A 144 nt-0.06□□□□□ -2.42
TDA8Q6B2U8 YHR131W-AYHR131W-A 246 nt-0.06□□□□□ -2.42
TDA8Q6B2U8 YJL026C-AYJL026C-A 222 nt-0.06□□□□□ -2.42
TDA8Q6B2U8 HTB2YBL002W 396 nt-0.06□□□□□ -2.42
TDA8Q6B2U8 YPL205CYPL205C 345 nt-0.06□□□□□ -2.42
TDA8Q6B2U8 COG8YML071C 1824 nt-0.06□□□□□ -2.42
TDA8Q6B2U8 YKU70YMR284W 1809 nt-0.07□□□□□ -2.42
TDA8Q6B2U8 RPL35AYDL191W 363 nt-0.08□□□□□ -2.42
TDA8Q6B2U8 PRM3YPL192C 402 nt-0.08□□□□□ -2.42
TDA8Q6B2U8 COY1YKL179C 2040 nt-0.08□□□□□ -2.42
TDA8Q6B2U8 SSS1YDR086C 243 nt-0.09□□□□□ -2.42
TDA8Q6B2U8 YLL006W-AYLL006W-A 177 nt-0.09□□□□□ -2.42
TDA8Q6B2U8 YER137W-AYER137W-A 306 nt-0.1□□□□□ -2.43
TDA8Q6B2U8 STF2YGR008C 255 nt-0.1□□□□□ -2.43
TDA8Q6B2U8 YOR121CYOR121C 306 nt-0.1□□□□□ -2.43
TDA8Q6B2U8 YBR285WYBR285W 435 nt-0.1□□□□□ -2.43
TDA8Q6B2U8 SOV1YMR066W 2697 nt-0.11□□□□□ -2.43
TDA8Q6B2U8 YER079WYER079W 633 nt-0.11□□□□□ -2.43
TDA8Q6B2U8 RPS27BYHR021C 249 nt-0.12□□□□□ -2.43
TDA8Q6B2U8 YAR053WYAR053W 297 nt-0.12□□□□□ -2.43
TDA8Q6B2U8 YNL324WYNL324W 396 nt-0.12□□□□□ -2.43
TDA8Q6B2U8 tF(GAA)BtF(GAA)B 73 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 tF(GAA)FtF(GAA)F 73 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 tF(GAA)GtF(GAA)G 73 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 tF(GAA)H1tF(GAA)H1 73 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 tF(GAA)H2tF(GAA)H2 73 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 tF(GAA)MtF(GAA)M 73 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 tF(GAA)P1tF(GAA)P1 73 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 tF(GAA)P2tF(GAA)P2 73 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 YEL020C-BYEL020C-B 198 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 AGA2YGL032C 264 nt-0.13□□□□□ -2.43
TDA8Q6B2U8 BLI1YKL061W 342 nt-0.14□□□□□ -2.43
TDA8Q6B2U8 YLR232WYLR232W 348 nt-0.14□□□□□ -2.43
TDA8Q6B2U8 YIL115W-AYIL115W-A 372 nt-0.15□□□□□ -2.43
TDA8Q6B2U8 YLR041WYLR041W 321 nt-0.15□□□□□ -2.43
TDA8Q6B2U8 CSE2YNR010W 450 nt-0.15□□□□□ -2.43
TDA8Q6B2U8 YOR161W-AYOR161W-A 81 nt-0.15□□□□□ -2.43
TDA8Q6B2U8 YEL073CYEL073C 324 nt-0.16□□□□□ -2.44
TDA8Q6B2U8 YKL100W-AYKL100W-A 90 nt-0.16□□□□□ -2.44
TDA8Q6B2U8 YMR001C-AYMR001C-A 231 nt-0.16□□□□□ -2.44
TDA8Q6B2U8 SNU13YEL026W 381 nt-0.17□□□□□ -2.44
TDA8Q6B2U8 YGL123C-AYGL123C-A 231 nt-0.17□□□□□ -2.44
TDA8Q6B2U8 tW(UCA)QtW(UCA)Q 74 nt-0.18□□□□□ -2.44
TDA8Q6B2U8 HUG1YML058W-A 207 nt-0.18□□□□□ -2.44
TDA8Q6B2U8 YDR048CYDR048C 315 nt-0.19□□□□□ -2.44
TDA8Q6B2U8 BIL1YOR304C-A 231 nt-0.19□□□□□ -2.44
TDA8Q6B2U8 YER078W-AYER078W-A 165 nt-0.21□□□□□ -2.44
TDA8Q6B2U8 YFL063WYFL063W 456 nt-0.21□□□□□ -2.44
TDA8Q6B2U8 snR45snR45 172 nt-0.21□□□□□ -2.44
TDA8Q6B2U8 YDR366CYDR366C 399 nt-0.22□□□□□ -2.44
TDA8Q6B2U8 snR8snR8 190 nt-0.23□□□□□ -2.45
TDA8Q6B2U8 YLR264C-AYLR264C-A 117 nt-0.23□□□□□ -2.45
TDA8Q6B2U8 THO2YNL139C 4794 nt-0.23□□□□□ -2.45
TDA8Q6B2U8 YJL197C-AYJL197C-A 282 nt-0.24□□□□□ -2.45
TDA8Q6B2U8 YOL014WYOL014W 375 nt-0.24□□□□□ -2.45
TDA8Q6B2U8 YBR072C-AYBR072C-A 162 nt-0.24□□□□□ -2.45
TDA8Q6B2U8 YAL068W-AYAL068W-A 255 nt-0.25□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 149 ms