Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.03■□□□□ 0.96
Col11a2Q64739 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Col11a2Q64739 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.03■□□□□ 0.96
Col11a2Q64739 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Col11a2Q64739 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a2Q64739 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.02■□□□□ 0.96
Col11a2Q64739 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a2Q64739 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Col11a2Q64739 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a2Q64739 Gm1401-201ENSMUST00000122048 772 ntBASIC21.02■□□□□ 0.96
Col11a2Q64739 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.02■□□□□ 0.96
Col11a2Q64739 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Col11a2Q64739 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a2Q64739 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.02■□□□□ 0.96
Col11a2Q64739 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a2Q64739 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a2Q64739 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a2Q64739 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a2Q64739 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a2Q64739 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.02■□□□□ 0.95
Col11a2Q64739 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Gm11779-201ENSMUST00000118541 368 ntBASIC21.01■□□□□ 0.95
Col11a2Q64739 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC21.01■□□□□ 0.95
Col11a2Q64739 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Col11a2Q64739 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.01■□□□□ 0.95
Col11a2Q64739 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC21.01■□□□□ 0.95
Col11a2Q64739 Gm12350-201ENSMUST00000121208 462 ntBASIC21.01■□□□□ 0.95
Col11a2Q64739 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a2Q64739 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col11a2Q64739 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col11a2Q64739 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col11a2Q64739 Gm6190-201ENSMUST00000220683 1374 ntBASIC21■□□□□ 0.95
Col11a2Q64739 Rprl3-201ENSMUST00000157400 290 ntBASIC21■□□□□ 0.95
Col11a2Q64739 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21■□□□□ 0.95
Col11a2Q64739 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col11a2Q64739 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col11a2Q64739 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col11a2Q64739 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col11a2Q64739 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col11a2Q64739 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
Col11a2Q64739 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.99■□□□□ 0.95
Col11a2Q64739 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.99■□□□□ 0.95
Col11a2Q64739 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.99■□□□□ 0.95
Col11a2Q64739 Gm6296-201ENSMUST00000222599 943 ntBASIC20.99■□□□□ 0.95
Col11a2Q64739 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col11a2Q64739 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col11a2Q64739 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col11a2Q64739 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col11a2Q64739 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.99■□□□□ 0.95
Col11a2Q64739 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col11a2Q64739 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.98■□□□□ 0.95
Col11a2Q64739 Gm10060-201ENSMUST00000212002 111 ntBASIC20.98■□□□□ 0.95
Col11a2Q64739 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a2Q64739 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col11a2Q64739 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a2Q64739 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Col11a2Q64739 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a2Q64739 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a2Q64739 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a2Q64739 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a2Q64739 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a2Q64739 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
Col11a2Q64739 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col11a2Q64739 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a2Q64739 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Col11a2Q64739 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a2Q64739 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a2Q64739 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.97■□□□□ 0.95
Col11a2Q64739 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a2Q64739 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a2Q64739 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a2Q64739 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.97■□□□□ 0.95
Col11a2Q64739 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a2Q64739 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a2Q64739 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col11a2Q64739 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms