Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm13836-201ENSMUST00000121159 501 ntBASIC16.63■□□□□ 0.25
Sdc3Q64519 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.63■□□□□ 0.25
Sdc3Q64519 Gm21814-202ENSMUST00000203277 873 ntBASIC16.63■□□□□ 0.25
Sdc3Q64519 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sdc3Q64519 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.62■□□□□ 0.25
Sdc3Q64519 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.62■□□□□ 0.25
Sdc3Q64519 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Sdc3Q64519 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Gm11643-201ENSMUST00000119578 864 ntBASIC16.62■□□□□ 0.25
Sdc3Q64519 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sdc3Q64519 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Gm3375-201ENSMUST00000203929 796 ntBASIC16.62■□□□□ 0.25
Sdc3Q64519 Gm29791-202ENSMUST00000207888 369 ntBASIC16.62■□□□□ 0.25
Sdc3Q64519 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.62■□□□□ 0.25
Sdc3Q64519 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Sdc3Q64519 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc3Q64519 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Sdc3Q64519 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.61■□□□□ 0.25
Sdc3Q64519 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Gm9987-201ENSMUST00000069768 567 ntBASIC16.61■□□□□ 0.25
Sdc3Q64519 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sdc3Q64519 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.61■□□□□ 0.25
Sdc3Q64519 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc3Q64519 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Sdc3Q64519 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc3Q64519 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.59■□□□□ 0.25
Sdc3Q64519 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc3Q64519 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc3Q64519 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc3Q64519 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc3Q64519 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Sdc3Q64519 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Sdc3Q64519 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc3Q64519 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.59■□□□□ 0.25
Sdc3Q64519 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc3Q64519 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc3Q64519 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sdc3Q64519 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Sdc3Q64519 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc3Q64519 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdc3Q64519 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sdc3Q64519 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Sdc3Q64519 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.58■□□□□ 0.24
Sdc3Q64519 Gm11539-201ENSMUST00000119837 557 ntBASIC16.58■□□□□ 0.24
Sdc3Q64519 Gm13436-201ENSMUST00000120418 567 ntBASIC16.58■□□□□ 0.24
Sdc3Q64519 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc3Q64519 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc3Q64519 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.58■□□□□ 0.24
Sdc3Q64519 Gm4974-201ENSMUST00000209974 875 ntBASIC16.58■□□□□ 0.24
Sdc3Q64519 Odf3b-204ENSMUST00000227834 930 ntBASIC16.58■□□□□ 0.24
Sdc3Q64519 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc3Q64519 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc3Q64519 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc3Q64519 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms