Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.59□□□□□ -0.39
Ndufa4Q62425 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Gm13241-201ENSMUST00000094493 780 ntBASIC12.59□□□□□ -0.39
Ndufa4Q62425 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufa4Q62425 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.58□□□□□ -0.39
Ndufa4Q62425 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ndufa4Q62425 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Mir8112-201ENSMUST00000184382 131 ntBASIC12.58□□□□□ -0.4
Ndufa4Q62425 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Gm9988-201ENSMUST00000069786 435 ntBASIC12.58□□□□□ -0.4
Ndufa4Q62425 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ndufa4Q62425 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.57□□□□□ -0.4
Ndufa4Q62425 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ndufa4Q62425 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndufa4Q62425 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.56□□□□□ -0.4
Ndufa4Q62425 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndufa4Q62425 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndufa4Q62425 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndufa4Q62425 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ndufa4Q62425 Gm43060-201ENSMUST00000200621 289 ntBASIC12.56□□□□□ -0.4
Ndufa4Q62425 Gm29791-202ENSMUST00000207888 369 ntBASIC12.56□□□□□ -0.4
Ndufa4Q62425 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.56□□□□□ -0.4
Ndufa4Q62425 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.56□□□□□ -0.4
Ndufa4Q62425 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndufa4Q62425 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndufa4Q62425 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ndufa4Q62425 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ndufa4Q62425 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms