Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.76■□□□□ 0.43
Six1Q62231 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Gm42545-201ENSMUST00000202755 922 ntBASIC17.76■□□□□ 0.43
Six1Q62231 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.76■□□□□ 0.43
Six1Q62231 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six1Q62231 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Six1Q62231 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.75■□□□□ 0.43
Six1Q62231 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Six1Q62231 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.75■□□□□ 0.43
Six1Q62231 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.75■□□□□ 0.43
Six1Q62231 Gm27275-201ENSMUST00000184318 272 ntBASIC17.75■□□□□ 0.43
Six1Q62231 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.75■□□□□ 0.43
Six1Q62231 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Six1Q62231 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Six1Q62231 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Six1Q62231 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six1Q62231 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Six1Q62231 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.74■□□□□ 0.43
Six1Q62231 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.74■□□□□ 0.43
Six1Q62231 Gm13158-201ENSMUST00000122007 736 ntBASIC17.74■□□□□ 0.43
Six1Q62231 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Six1Q62231 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Six1Q62231 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Six1Q62231 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six1Q62231 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Six1Q62231 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Six1Q62231 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.73■□□□□ 0.43
Six1Q62231 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.73■□□□□ 0.43
Six1Q62231 Gm37292-201ENSMUST00000192062 758 ntBASIC17.73■□□□□ 0.43
Six1Q62231 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.73■□□□□ 0.43
Six1Q62231 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Six1Q62231 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.73■□□□□ 0.43
Six1Q62231 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Six1Q62231 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six1Q62231 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Six1Q62231 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Six1Q62231 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms