Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.34■□□□□ 0.05
Traf4Q61382 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Traf4Q61382 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.33■□□□□ 0.05
Traf4Q61382 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Traf4Q61382 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Traf4Q61382 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Traf4Q61382 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Traf4Q61382 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Traf4Q61382 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Traf4Q61382 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.33■□□□□ 0.04
Traf4Q61382 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.33■□□□□ 0.04
Traf4Q61382 Gm15565-201ENSMUST00000118890 427 ntBASIC15.33■□□□□ 0.04
Traf4Q61382 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.33■□□□□ 0.04
Traf4Q61382 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Traf4Q61382 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Traf4Q61382 Gm7977-201ENSMUST00000193787 748 ntBASIC15.33■□□□□ 0.04
Traf4Q61382 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Traf4Q61382 Gm10138-203ENSMUST00000206952 366 ntBASIC15.33■□□□□ 0.04
Traf4Q61382 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Traf4Q61382 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Traf4Q61382 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Traf4Q61382 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Traf4Q61382 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.32■□□□□ 0.04
Traf4Q61382 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Traf4Q61382 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Traf4Q61382 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.32■□□□□ 0.04
Traf4Q61382 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.32■□□□□ 0.04
Traf4Q61382 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.32■□□□□ 0.04
Traf4Q61382 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Traf4Q61382 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.32■□□□□ 0.04
Traf4Q61382 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Traf4Q61382 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Traf4Q61382 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Traf4Q61382 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.31■□□□□ 0.04
Traf4Q61382 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.31■□□□□ 0.04
Traf4Q61382 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Traf4Q61382 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Traf4Q61382 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.3■□□□□ 0.04
Traf4Q61382 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.3■□□□□ 0.04
Traf4Q61382 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Traf4Q61382 Mir5122-201ENSMUST00000175004 89 ntBASIC15.3■□□□□ 0.04
Traf4Q61382 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.3■□□□□ 0.04
Traf4Q61382 Gm38285-201ENSMUST00000192928 922 ntBASIC15.3■□□□□ 0.04
Traf4Q61382 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.3■□□□□ 0.04
Traf4Q61382 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.3■□□□□ 0.04
Traf4Q61382 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.3■□□□□ 0.04
Traf4Q61382 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms