Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.86□□□□□ -0.03
Clns1aQ61189 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Clns1aQ61189 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clns1aQ61189 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.86□□□□□ -0.03
Clns1aQ61189 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clns1aQ61189 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Clns1aQ61189 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Clns1aQ61189 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Clns1aQ61189 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.85□□□□□ -0.03
Clns1aQ61189 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Clns1aQ61189 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.85□□□□□ -0.03
Clns1aQ61189 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clns1aQ61189 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.84□□□□□ -0.03
Clns1aQ61189 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Clns1aQ61189 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Clns1aQ61189 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clns1aQ61189 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clns1aQ61189 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clns1aQ61189 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clns1aQ61189 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clns1aQ61189 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Clns1aQ61189 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Clns1aQ61189 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Clns1aQ61189 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clns1aQ61189 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Clns1aQ61189 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.83□□□□□ -0.04
Clns1aQ61189 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.83□□□□□ -0.04
Clns1aQ61189 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clns1aQ61189 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clns1aQ61189 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clns1aQ61189 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clns1aQ61189 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clns1aQ61189 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clns1aQ61189 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Clns1aQ61189 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Clns1aQ61189 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clns1aQ61189 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clns1aQ61189 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clns1aQ61189 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Clns1aQ61189 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clns1aQ61189 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clns1aQ61189 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.82□□□□□ -0.04
Clns1aQ61189 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clns1aQ61189 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clns1aQ61189 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Clns1aQ61189 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clns1aQ61189 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clns1aQ61189 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clns1aQ61189 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms