Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim38Q5SZ99 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim38Q5SZ99 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.97■□□□□ 0.47
Trim38Q5SZ99 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim38Q5SZ99 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Gm4974-201ENSMUST00000209974 875 ntBASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim38Q5SZ99 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trim38Q5SZ99 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Gm5643-201ENSMUST00000117081 966 ntBASIC17.95■□□□□ 0.46
Trim38Q5SZ99 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim38Q5SZ99 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Gm29257-201ENSMUST00000186115 639 ntBASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim38Q5SZ99 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Gm15378-201ENSMUST00000121894 207 ntBASIC17.93■□□□□ 0.46
Trim38Q5SZ99 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim38Q5SZ99 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.93■□□□□ 0.46
Trim38Q5SZ99 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Gm43183-201ENSMUST00000200632 547 ntBASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim38Q5SZ99 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms