Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Golph3-205ENSMUST00000228671 2842 ntBASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Gm43347-201ENSMUST00000200226 580 ntBASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc85aQ5SP85 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Gm13884-201ENSMUST00000118103 829 ntBASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 AW822252-206ENSMUST00000208904 237 ntBASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc85aQ5SP85 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc85aQ5SP85 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ccdc85aQ5SP85 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.08■□□□□ 0.65
Ccdc85aQ5SP85 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc85aQ5SP85 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc85aQ5SP85 Gm27459-201ENSMUST00000184860 107 ntBASIC19.08■□□□□ 0.64
Ccdc85aQ5SP85 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.08■□□□□ 0.64
Ccdc85aQ5SP85 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ccdc85aQ5SP85 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc85aQ5SP85 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc85aQ5SP85 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc85aQ5SP85 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc85aQ5SP85 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Gm11452-201ENSMUST00000122376 690 ntBASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc85aQ5SP85 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc85aQ5SP85 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc85aQ5SP85 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ccdc85aQ5SP85 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.06■□□□□ 0.64
Ccdc85aQ5SP85 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc85aQ5SP85 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc85aQ5SP85 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ccdc85aQ5SP85 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ccdc85aQ5SP85 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 Gm15794-201ENSMUST00000120182 631 ntBASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc85aQ5SP85 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms