Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8d-1Q5R1H8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav8d-1Q5R1H8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav8d-1Q5R1H8 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.21□□□□□ -0.14
Trav8d-1Q5R1H8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav8d-1Q5R1H8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav8d-1Q5R1H8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Gm12933-201ENSMUST00000120203 872 ntBASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav8d-1Q5R1H8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Gm37179-201ENSMUST00000194862 823 ntBASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-1Q5R1H8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-1Q5R1H8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms