Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-3Q5R1E6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Dio3-201ENSMUST00000097228 1449 ntBASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-3Q5R1E6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.9□□□□□ -0.18
Trav6-3Q5R1E6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.9□□□□□ -0.19
Trav6-3Q5R1E6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav6-3Q5R1E6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Gm6576-201ENSMUST00000169678 883 ntBASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.89□□□□□ -0.19
Trav6-3Q5R1E6 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Gm37179-201ENSMUST00000194862 823 ntBASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms