Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-2Q5R1A4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Nespas-201ENSMUST00000143738 1083 ntBASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Gm6420-201ENSMUST00000193885 723 ntBASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-2Q5R1A4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv2-2Q5R1A4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.27□□□□□ -0.28
Trdv2-2Q5R1A4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv2-2Q5R1A4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv2-2Q5R1A4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trdv2-2Q5R1A4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv2-2Q5R1A4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv2-2Q5R1A4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-2Q5R1A4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trdv2-2Q5R1A4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdv2-2Q5R1A4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trdv2-2Q5R1A4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdv2-2Q5R1A4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdv2-2Q5R1A4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdv2-2Q5R1A4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdv2-2Q5R1A4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdv2-2Q5R1A4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms