Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Gm7791-201ENSMUST00000219066 539 ntBASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm4Q4VBF2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Gm11539-201ENSMUST00000119837 557 ntBASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Gm13436-201ENSMUST00000120418 567 ntBASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Gm37025-201ENSMUST00000195159 829 ntBASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm4Q4VBF2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Gm17661-201ENSMUST00000170317 270 ntBASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm4Q4VBF2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
R3hdm4Q4VBF2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
R3hdm4Q4VBF2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Gm43799-201ENSMUST00000201845 579 ntBASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Gm9731-201ENSMUST00000209480 747 ntBASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.64■□□□□ 0.57
R3hdm4Q4VBF2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm4Q4VBF2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Gm13559-201ENSMUST00000120476 863 ntBASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm4Q4VBF2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms