Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.39■□□□□ 0.54
Syne3Q4FZC9 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne3Q4FZC9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Gm10418-201ENSMUST00000100943 576 ntBASIC18.38■□□□□ 0.53
Syne3Q4FZC9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.38■□□□□ 0.53
Syne3Q4FZC9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.37■□□□□ 0.53
Syne3Q4FZC9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Mir2861-201ENSMUST00000175539 82 ntBASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Gm18025-201ENSMUST00000221733 862 ntBASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Syne3Q4FZC9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Syne3Q4FZC9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Gm42545-201ENSMUST00000202755 922 ntBASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Syne3Q4FZC9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syne3Q4FZC9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Syne3Q4FZC9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syne3Q4FZC9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syne3Q4FZC9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Syne3Q4FZC9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Gm10698-201ENSMUST00000182663 604 ntBASIC18.33■□□□□ 0.52
Syne3Q4FZC9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Syne3Q4FZC9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms