Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Fam196aQ3USH1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fam196aQ3USH1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fam196aQ3USH1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fam196aQ3USH1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fam196aQ3USH1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fam196aQ3USH1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Gm6296-201ENSMUST00000222599 943 ntBASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.33■□□□□ 0.36
Fam196aQ3USH1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Fam196aQ3USH1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Gm11779-201ENSMUST00000118541 368 ntBASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam196aQ3USH1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Gm12350-201ENSMUST00000121208 462 ntBASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam196aQ3USH1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.29■□□□□ 0.36
Fam196aQ3USH1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam196aQ3USH1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam196aQ3USH1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms