Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Spg7Q3ULF4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Spg7Q3ULF4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Spg7Q3ULF4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.65■□□□□ 0.9
Spg7Q3ULF4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Spg7Q3ULF4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Spg7Q3ULF4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Gm18958-201ENSMUST00000174258 762 ntBASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Iqck-206ENSMUST00000208658 2891 ntBASIC20.64■□□□□ 0.89
Spg7Q3ULF4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Spg7Q3ULF4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Spg7Q3ULF4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Spg7Q3ULF4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Gm7284-201ENSMUST00000131667 944 ntBASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Spg7Q3ULF4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Spg7Q3ULF4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Spg7Q3ULF4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Spg7Q3ULF4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Spg7Q3ULF4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Spg7Q3ULF4 Actl10-202ENSMUST00000226583 1501 ntBASIC20.59■□□□□ 0.89
Spg7Q3ULF4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Spg7Q3ULF4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.59■□□□□ 0.89
Spg7Q3ULF4 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms