Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Col5a2Q3U962 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col5a2Q3U962 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44357-201ENSMUST00000195897 142 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm19658-201ENSMUST00000196231 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44367-201ENSMUST00000196836 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44350-201ENSMUST00000197197 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44390-201ENSMUST00000197533 144 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44313-201ENSMUST00000198018 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44486-201ENSMUST00000198508 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44454-201ENSMUST00000198541 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44314-201ENSMUST00000199263 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44394-201ENSMUST00000199558 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44484-201ENSMUST00000199873 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44466-201ENSMUST00000200264 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Gm44359-201ENSMUST00000200671 138 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.54■□□□□ 0.88
Col5a2Q3U962 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col5a2Q3U962 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.53■□□□□ 0.88
Col5a2Q3U962 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.53■□□□□ 0.88
Col5a2Q3U962 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Col5a2Q3U962 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col5a2Q3U962 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col5a2Q3U962 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col5a2Q3U962 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Col5a2Q3U962 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.52■□□□□ 0.88
Col5a2Q3U962 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col5a2Q3U962 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.52■□□□□ 0.88
Col5a2Q3U962 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.52■□□□□ 0.88
Col5a2Q3U962 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col5a2Q3U962 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col5a2Q3U962 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.52■□□□□ 0.88
Col5a2Q3U962 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col5a2Q3U962 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col5a2Q3U962 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Col5a2Q3U962 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col5a2Q3U962 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col5a2Q3U962 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.5■□□□□ 0.87
Col5a2Q3U962 Gm12350-201ENSMUST00000121208 462 ntBASIC20.5■□□□□ 0.87
Col5a2Q3U962 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.5■□□□□ 0.87
Col5a2Q3U962 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Col5a2Q3U962 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col5a2Q3U962 Fst-202ENSMUST00000223640 2612 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms