Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC11.93□□□□□ -0.5
Cops9Q3U898 Gm37563-201ENSMUST00000192580 1513 ntBASIC11.93□□□□□ -0.5
Cops9Q3U898 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Gm11175-201ENSMUST00000116172 543 ntBASIC11.93□□□□□ -0.5
Cops9Q3U898 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC11.93□□□□□ -0.5
Cops9Q3U898 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.93□□□□□ -0.5
Cops9Q3U898 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cops9Q3U898 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cops9Q3U898 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cops9Q3U898 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cops9Q3U898 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cops9Q3U898 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC11.92□□□□□ -0.5
Cops9Q3U898 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC11.92□□□□□ -0.5
Cops9Q3U898 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cops9Q3U898 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Cops9Q3U898 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cops9Q3U898 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cops9Q3U898 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Cops9Q3U898 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cops9Q3U898 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC11.91□□□□□ -0.5
Cops9Q3U898 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cops9Q3U898 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cops9Q3U898 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cops9Q3U898 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.9□□□□□ -0.5
Cops9Q3U898 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Cops9Q3U898 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.9□□□□□ -0.5
Cops9Q3U898 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cops9Q3U898 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Cops9Q3U898 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Gm13216-201ENSMUST00000117145 591 ntBASIC11.9□□□□□ -0.5
Cops9Q3U898 Gm8309-201ENSMUST00000206627 1448 ntBASIC11.9□□□□□ -0.5
Cops9Q3U898 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cops9Q3U898 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms