Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.05■□□□□ 0.32
Q3KNL4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Q3KNL4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.05■□□□□ 0.32
Q3KNL4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.04■□□□□ 0.32
Q3KNL4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.04■□□□□ 0.32
Q3KNL4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.04■□□□□ 0.32
Q3KNL4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Q3KNL4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Q3KNL4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.04■□□□□ 0.32
Q3KNL4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Q3KNL4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.04■□□□□ 0.32
Q3KNL4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q3KNL4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.03■□□□□ 0.32
Q3KNL4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.03■□□□□ 0.32
Q3KNL4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.03■□□□□ 0.32
Q3KNL4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.03■□□□□ 0.32
Q3KNL4 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.03■□□□□ 0.32
Q3KNL4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Q3KNL4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.03■□□□□ 0.32
Q3KNL4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Q3KNL4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Q3KNL4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Q3KNL4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.02■□□□□ 0.32
Q3KNL4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Q3KNL4 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.02■□□□□ 0.32
Q3KNL4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q3KNL4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q3KNL4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q3KNL4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Q3KNL4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Q3KNL4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.01■□□□□ 0.31
Q3KNL4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.01■□□□□ 0.31
Q3KNL4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Q3KNL4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.01■□□□□ 0.31
Q3KNL4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Gm11927-201ENSMUST00000118472 759 ntBASIC17.01■□□□□ 0.31
Q3KNL4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.01■□□□□ 0.31
Q3KNL4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.01■□□□□ 0.31
Q3KNL4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Q3KNL4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Q3KNL4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q3KNL4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Q3KNL4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17■□□□□ 0.31
Q3KNL4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q3KNL4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q3KNL4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q3KNL4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Q3KNL4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Q3KNL4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
Q3KNL4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms