Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.96■□□□□ 0.15
Col10a1Q05306 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col10a1Q05306 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col10a1Q05306 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col10a1Q05306 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col10a1Q05306 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col10a1Q05306 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col10a1Q05306 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col10a1Q05306 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.95■□□□□ 0.14
Col10a1Q05306 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Col10a1Q05306 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col10a1Q05306 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.95■□□□□ 0.14
Col10a1Q05306 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Col10a1Q05306 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.95■□□□□ 0.14
Col10a1Q05306 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.95■□□□□ 0.14
Col10a1Q05306 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col10a1Q05306 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col10a1Q05306 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Col10a1Q05306 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col10a1Q05306 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col10a1Q05306 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col10a1Q05306 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.94■□□□□ 0.14
Col10a1Q05306 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.94■□□□□ 0.14
Col10a1Q05306 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.94■□□□□ 0.14
Col10a1Q05306 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.94■□□□□ 0.14
Col10a1Q05306 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.94■□□□□ 0.14
Col10a1Q05306 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Col10a1Q05306 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.94■□□□□ 0.14
Col10a1Q05306 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col10a1Q05306 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Col10a1Q05306 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col10a1Q05306 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.93■□□□□ 0.14
Col10a1Q05306 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Col10a1Q05306 Gm24841-201ENSMUST00000158676 357 ntBASIC15.93■□□□□ 0.14
Col10a1Q05306 Mir5122-201ENSMUST00000175004 89 ntBASIC15.93■□□□□ 0.14
Col10a1Q05306 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.93■□□□□ 0.14
Col10a1Q05306 Timm23-208ENSMUST00000226683 750 ntBASIC15.93■□□□□ 0.14
Col10a1Q05306 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Col10a1Q05306 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col10a1Q05306 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Col10a1Q05306 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.93■□□□□ 0.14
Col10a1Q05306 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.93■□□□□ 0.14
Col10a1Q05306 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.93■□□□□ 0.14
Col10a1Q05306 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col10a1Q05306 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.92■□□□□ 0.14
Col10a1Q05306 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.92■□□□□ 0.14
Col10a1Q05306 Gm10252-201ENSMUST00000209541 832 ntBASIC15.92■□□□□ 0.14
Col10a1Q05306 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.92■□□□□ 0.14
Col10a1Q05306 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.92■□□□□ 0.14
Col10a1Q05306 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col10a1Q05306 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col10a1Q05306 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms