Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CiitaP79621 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CiitaP79621 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.78■□□□□ 0.6
CiitaP79621 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CiitaP79621 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.77■□□□□ 0.6
CiitaP79621 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CiitaP79621 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CiitaP79621 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CiitaP79621 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CiitaP79621 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.76■□□□□ 0.59
CiitaP79621 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CiitaP79621 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.76■□□□□ 0.59
CiitaP79621 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CiitaP79621 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.75■□□□□ 0.59
CiitaP79621 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CiitaP79621 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CiitaP79621 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CiitaP79621 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CiitaP79621 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CiitaP79621 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CiitaP79621 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CiitaP79621 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CiitaP79621 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CiitaP79621 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CiitaP79621 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CiitaP79621 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CiitaP79621 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CiitaP79621 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CiitaP79621 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CiitaP79621 Gm10013-201ENSMUST00000106074 672 ntBASIC18.74■□□□□ 0.59
CiitaP79621 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CiitaP79621 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CiitaP79621 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.73■□□□□ 0.59
CiitaP79621 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.73■□□□□ 0.59
CiitaP79621 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CiitaP79621 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.73■□□□□ 0.59
CiitaP79621 Gm8969-201ENSMUST00000199694 526 ntBASIC18.73■□□□□ 0.59
CiitaP79621 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.73■□□□□ 0.59
CiitaP79621 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CiitaP79621 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CiitaP79621 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CiitaP79621 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CiitaP79621 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CiitaP79621 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CiitaP79621 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CiitaP79621 Gm22697-201ENSMUST00000175194 63 ntBASIC18.72■□□□□ 0.59
CiitaP79621 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CiitaP79621 Mir1668-201ENSMUST00000184114 107 ntBASIC18.72■□□□□ 0.59
CiitaP79621 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.72■□□□□ 0.59
CiitaP79621 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CiitaP79621 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CiitaP79621 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.72■□□□□ 0.59
CiitaP79621 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CiitaP79621 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CiitaP79621 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CiitaP79621 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms