Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Crnkl1P63154 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Gm26571-201ENSMUST00000181399 666 ntBASIC17.15■□□□□ 0.34
Crnkl1P63154 Gm38205-201ENSMUST00000192243 258 ntBASIC17.15■□□□□ 0.34
Crnkl1P63154 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Crnkl1P63154 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Crnkl1P63154 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Crnkl1P63154 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crnkl1P63154 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.14■□□□□ 0.34
Crnkl1P63154 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Crnkl1P63154 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.14■□□□□ 0.33
Crnkl1P63154 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Crnkl1P63154 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.14■□□□□ 0.33
Crnkl1P63154 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.14■□□□□ 0.33
Crnkl1P63154 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.14■□□□□ 0.33
Crnkl1P63154 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.14■□□□□ 0.33
Crnkl1P63154 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Crnkl1P63154 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crnkl1P63154 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.13■□□□□ 0.33
Crnkl1P63154 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Crnkl1P63154 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.13■□□□□ 0.33
Crnkl1P63154 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Crnkl1P63154 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.13■□□□□ 0.33
Crnkl1P63154 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.13■□□□□ 0.33
Crnkl1P63154 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.13■□□□□ 0.33
Crnkl1P63154 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Crnkl1P63154 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Crnkl1P63154 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Crnkl1P63154 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.12■□□□□ 0.33
Crnkl1P63154 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Gm10849-201ENSMUST00000100397 618 ntBASIC17.12■□□□□ 0.33
Crnkl1P63154 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Crnkl1P63154 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.12■□□□□ 0.33
Crnkl1P63154 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crnkl1P63154 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Crnkl1P63154 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.11■□□□□ 0.33
Crnkl1P63154 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Crnkl1P63154 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Crnkl1P63154 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.11■□□□□ 0.33
Crnkl1P63154 Gm27405-201ENSMUST00000184201 112 ntBASIC17.11■□□□□ 0.33
Crnkl1P63154 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Crnkl1P63154 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crnkl1P63154 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms