Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rpl39P62892 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.4□□□□□ -0.42
Rpl39P62892 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.4□□□□□ -0.42
Rpl39P62892 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rpl39P62892 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpl39P62892 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rpl39P62892 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpl39P62892 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rpl39P62892 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpl39P62892 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpl39P62892 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Gm12821-201ENSMUST00000120022 600 ntBASIC12.39□□□□□ -0.43
Rpl39P62892 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rpl39P62892 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rpl39P62892 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpl39P62892 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.39□□□□□ -0.43
Rpl39P62892 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpl39P62892 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rpl39P62892 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpl39P62892 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Rpl39P62892 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.38□□□□□ -0.43
Rpl39P62892 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rpl39P62892 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpl39P62892 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rpl39P62892 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl39P62892 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rpl39P62892 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.37□□□□□ -0.43
Rpl39P62892 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Rpl39P62892 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.37□□□□□ -0.43
Rpl39P62892 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.37□□□□□ -0.43
Rpl39P62892 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.37□□□□□ -0.43
Rpl39P62892 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.37□□□□□ -0.43
Rpl39P62892 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Rpl39P62892 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpl39P62892 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpl39P62892 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpl39P62892 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpl39P62892 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl39P62892 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl39P62892 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpl39P62892 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms