Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek1P51954 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.3■□□□□ 0.68
Nek1P51954 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.3■□□□□ 0.68
Nek1P51954 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek1P51954 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nek1P51954 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nek1P51954 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nek1P51954 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek1P51954 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nek1P51954 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Nek1P51954 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek1P51954 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Nek1P51954 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek1P51954 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek1P51954 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nek1P51954 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek1P51954 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek1P51954 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nek1P51954 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.28■□□□□ 0.68
Nek1P51954 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nek1P51954 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nek1P51954 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nek1P51954 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Nek1P51954 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nek1P51954 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek1P51954 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek1P51954 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek1P51954 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek1P51954 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.27■□□□□ 0.68
Nek1P51954 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.27■□□□□ 0.68
Nek1P51954 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek1P51954 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek1P51954 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nek1P51954 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nek1P51954 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nek1P51954 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nek1P51954 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nek1P51954 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Nek1P51954 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nek1P51954 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nek1P51954 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nek1P51954 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.27■□□□□ 0.67
Nek1P51954 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek1P51954 Dio3-201ENSMUST00000097228 1449 ntBASIC19.26■□□□□ 0.67
Nek1P51954 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.26■□□□□ 0.67
Nek1P51954 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.26■□□□□ 0.67
Nek1P51954 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek1P51954 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.26■□□□□ 0.67
Nek1P51954 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.26■□□□□ 0.67
Nek1P51954 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek1P51954 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Nek1P51954 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.26■□□□□ 0.67
Nek1P51954 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.26■□□□□ 0.67
Nek1P51954 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek1P51954 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nek1P51954 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek1P51954 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek1P51954 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nek1P51954 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nek1P51954 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nek1P51954 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Nek1P51954 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nek1P51954 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
Nek1P51954 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.25■□□□□ 0.67
Nek1P51954 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.25■□□□□ 0.67
Nek1P51954 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nek1P51954 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nek1P51954 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nek1P51954 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nek1P51954 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nek1P51954 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nek1P51954 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.24■□□□□ 0.67
Nek1P51954 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nek1P51954 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms