Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc2P43407 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sdc2P43407 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sdc2P43407 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc2P43407 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sdc2P43407 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc2P43407 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc2P43407 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sdc2P43407 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.44■□□□□ 0.7
Sdc2P43407 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.44■□□□□ 0.7
Sdc2P43407 Gm12896-201ENSMUST00000118430 226 ntBASIC19.44■□□□□ 0.7
Sdc2P43407 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc2P43407 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Sdc2P43407 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sdc2P43407 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sdc2P43407 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 Gm15039-201ENSMUST00000118914 875 ntBASIC19.43■□□□□ 0.7
Sdc2P43407 Gm11643-201ENSMUST00000119578 864 ntBASIC19.43■□□□□ 0.7
Sdc2P43407 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.43■□□□□ 0.7
Sdc2P43407 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sdc2P43407 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.43■□□□□ 0.7
Sdc2P43407 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.43■□□□□ 0.7
Sdc2P43407 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc2P43407 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.42■□□□□ 0.7
Sdc2P43407 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Gm15375-201ENSMUST00000119510 849 ntBASIC19.42■□□□□ 0.7
Sdc2P43407 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.42■□□□□ 0.7
Sdc2P43407 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.42■□□□□ 0.7
Sdc2P43407 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.42■□□□□ 0.7
Sdc2P43407 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Sdc2P43407 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc2P43407 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sdc2P43407 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sdc2P43407 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sdc2P43407 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sdc2P43407 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sdc2P43407 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc2P43407 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sdc2P43407 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Gm11249-201ENSMUST00000117071 859 ntBASIC19.4■□□□□ 0.7
Sdc2P43407 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.4■□□□□ 0.7
Sdc2P43407 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sdc2P43407 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.4■□□□□ 0.7
Sdc2P43407 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.4■□□□□ 0.7
Sdc2P43407 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc2P43407 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sdc2P43407 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sdc2P43407 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sdc2P43407 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc2P43407 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sdc2P43407 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc2P43407 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sdc2P43407 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.39■□□□□ 0.69
Sdc2P43407 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.39■□□□□ 0.69
Sdc2P43407 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc2P43407 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc2P43407 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.39■□□□□ 0.69
Sdc2P43407 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.39■□□□□ 0.69
Sdc2P43407 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.39■□□□□ 0.69
Sdc2P43407 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms