Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdx2P43241 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdx2P43241 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdx2P43241 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdx2P43241 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdx2P43241 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdx2P43241 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdx2P43241 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdx2P43241 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cdx2P43241 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdx2P43241 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cdx2P43241 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.43■□□□□ 0.22
Cdx2P43241 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdx2P43241 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdx2P43241 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.43■□□□□ 0.22
Cdx2P43241 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.43■□□□□ 0.22
Cdx2P43241 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdx2P43241 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Cdx2P43241 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdx2P43241 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cdx2P43241 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cdx2P43241 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdx2P43241 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdx2P43241 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.42■□□□□ 0.22
Cdx2P43241 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.42■□□□□ 0.22
Cdx2P43241 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.42■□□□□ 0.22
Cdx2P43241 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Cdx2P43241 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Cdx2P43241 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Cdx2P43241 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.42■□□□□ 0.22
Cdx2P43241 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdx2P43241 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdx2P43241 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdx2P43241 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.42■□□□□ 0.22
Cdx2P43241 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdx2P43241 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.41■□□□□ 0.22
Cdx2P43241 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Mir8112-201ENSMUST00000184382 131 ntBASIC16.41■□□□□ 0.22
Cdx2P43241 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cdx2P43241 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.41■□□□□ 0.22
Cdx2P43241 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdx2P43241 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdx2P43241 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Cdx2P43241 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cdx2P43241 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdx2P43241 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdx2P43241 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdx2P43241 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cdx2P43241 Birc2-201ENSMUST00000054878 378 ntBASIC16.4■□□□□ 0.22
Cdx2P43241 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cdx2P43241 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdx2P43241 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Cdx2P43241 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdx2P43241 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdx2P43241 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdx2P43241 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdx2P43241 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdx2P43241 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdx2P43241 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Cdx2P43241 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdx2P43241 Gm15794-201ENSMUST00000120182 631 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms