Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.06■□□□□ 0.32
Cd9P40240 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cd9P40240 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cd9P40240 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.06■□□□□ 0.32
Cd9P40240 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cd9P40240 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Cd9P40240 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cd9P40240 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Timm23-208ENSMUST00000226683 750 ntBASIC17.05■□□□□ 0.32
Cd9P40240 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cd9P40240 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cd9P40240 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Cd9P40240 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cd9P40240 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cd9P40240 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Cd9P40240 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd9P40240 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cd9P40240 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.04■□□□□ 0.32
Cd9P40240 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cd9P40240 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cd9P40240 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd9P40240 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cd9P40240 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd9P40240 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd9P40240 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd9P40240 Gm7638-201ENSMUST00000121348 967 ntBASIC17.03■□□□□ 0.32
Cd9P40240 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cd9P40240 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd9P40240 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd9P40240 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd9P40240 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cd9P40240 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd9P40240 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd9P40240 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd9P40240 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd9P40240 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cd9P40240 Gm21814-202ENSMUST00000203277 873 ntBASIC17.02■□□□□ 0.32
Cd9P40240 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.02■□□□□ 0.32
Cd9P40240 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd9P40240 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.02■□□□□ 0.32
Cd9P40240 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.02■□□□□ 0.31
Cd9P40240 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd9P40240 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.02■□□□□ 0.31
Cd9P40240 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cd9P40240 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd9P40240 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd9P40240 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd9P40240 Gm715-201ENSMUST00000117865 831 ntBASIC17.01■□□□□ 0.31
Cd9P40240 Gm12085-201ENSMUST00000119263 940 ntBASIC17.01■□□□□ 0.31
Cd9P40240 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd9P40240 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.01■□□□□ 0.31
Cd9P40240 Gm22240-201ENSMUST00000175225 82 ntBASIC17.01■□□□□ 0.31
Cd9P40240 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd9P40240 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd9P40240 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cd9P40240 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd9P40240 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Cd9P40240 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd9P40240 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd9P40240 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cd9P40240 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd9P40240 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd9P40240 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd9P40240 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17■□□□□ 0.31
Cd9P40240 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cd9P40240 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd9P40240 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17■□□□□ 0.31
Cd9P40240 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms