Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Fen1P39749 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.44■□□□□ 0.38
Fen1P39749 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.44■□□□□ 0.38
Fen1P39749 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.44■□□□□ 0.38
Fen1P39749 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.44■□□□□ 0.38
Fen1P39749 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.44■□□□□ 0.38
Fen1P39749 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Fen1P39749 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Fen1P39749 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.44■□□□□ 0.38
Fen1P39749 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fen1P39749 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.43■□□□□ 0.38
Fen1P39749 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Fen1P39749 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Fen1P39749 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Fen1P39749 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Fen1P39749 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.43■□□□□ 0.38
Fen1P39749 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fen1P39749 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.42■□□□□ 0.38
Fen1P39749 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fen1P39749 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fen1P39749 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.42■□□□□ 0.38
Fen1P39749 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.42■□□□□ 0.38
Fen1P39749 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fen1P39749 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fen1P39749 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fen1P39749 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Fen1P39749 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fen1P39749 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fen1P39749 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.41■□□□□ 0.38
Fen1P39749 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.41■□□□□ 0.38
Fen1P39749 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Fen1P39749 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fen1P39749 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.4■□□□□ 0.38
Fen1P39749 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Fen1P39749 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.4■□□□□ 0.38
Fen1P39749 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.4■□□□□ 0.38
Fen1P39749 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.4■□□□□ 0.38
Fen1P39749 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.4■□□□□ 0.38
Fen1P39749 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Fen1P39749 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fen1P39749 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Fen1P39749 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Fen1P39749 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Fen1P39749 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fen1P39749 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Fen1P39749 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fen1P39749 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Fen1P39749 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fen1P39749 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fen1P39749 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fen1P39749 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms