Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox5P35710 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox5P35710 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox5P35710 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sox5P35710 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.92■□□□□ 0.62
Sox5P35710 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 Gm11643-201ENSMUST00000119578 864 ntBASIC18.92■□□□□ 0.62
Sox5P35710 Mir5133-201ENSMUST00000174955 77 ntBASIC18.92■□□□□ 0.62
Sox5P35710 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sox5P35710 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.92■□□□□ 0.62
Sox5P35710 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sox5P35710 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sox5P35710 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sox5P35710 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox5P35710 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.92■□□□□ 0.62
Sox5P35710 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sox5P35710 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.91■□□□□ 0.62
Sox5P35710 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.91■□□□□ 0.62
Sox5P35710 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox5P35710 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.9■□□□□ 0.62
Sox5P35710 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox5P35710 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox5P35710 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox5P35710 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 Gm13216-201ENSMUST00000117145 591 ntBASIC18.9■□□□□ 0.62
Sox5P35710 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.9■□□□□ 0.62
Sox5P35710 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 Mir6349-201ENSMUST00000184059 97 ntBASIC18.9■□□□□ 0.62
Sox5P35710 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.9■□□□□ 0.62
Sox5P35710 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox5P35710 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Sox5P35710 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox5P35710 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sox5P35710 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.89■□□□□ 0.62
Sox5P35710 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sox5P35710 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Sox5P35710 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.89■□□□□ 0.61
Sox5P35710 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.89■□□□□ 0.61
Sox5P35710 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.89■□□□□ 0.61
Sox5P35710 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.89■□□□□ 0.61
Sox5P35710 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox5P35710 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox5P35710 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox5P35710 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox5P35710 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox5P35710 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sox5P35710 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.88■□□□□ 0.61
Sox5P35710 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.88■□□□□ 0.61
Sox5P35710 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox5P35710 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.88■□□□□ 0.61
Sox5P35710 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sox5P35710 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox5P35710 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms