Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Slc6a1P31648 Gm26571-201ENSMUST00000181399 666 ntBASIC14.9□□□□□ -0.02
Slc6a1P31648 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.9□□□□□ -0.02
Slc6a1P31648 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Slc6a1P31648 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Slc6a1P31648 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Slc6a1P31648 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Slc6a1P31648 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Slc6a1P31648 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.9□□□□□ -0.02
Slc6a1P31648 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Slc6a1P31648 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Slc6a1P31648 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.89□□□□□ -0.03
Slc6a1P31648 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Slc6a1P31648 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Slc6a1P31648 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.89□□□□□ -0.03
Slc6a1P31648 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.89□□□□□ -0.03
Slc6a1P31648 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Slc6a1P31648 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.89□□□□□ -0.03
Slc6a1P31648 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.89□□□□□ -0.03
Slc6a1P31648 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Slc6a1P31648 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slc6a1P31648 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.89□□□□□ -0.03
Slc6a1P31648 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.88□□□□□ -0.03
Slc6a1P31648 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.88□□□□□ -0.03
Slc6a1P31648 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Slc6a1P31648 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Slc6a1P31648 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.88□□□□□ -0.03
Slc6a1P31648 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.88□□□□□ -0.03
Slc6a1P31648 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Slc6a1P31648 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.88□□□□□ -0.03
Slc6a1P31648 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a1P31648 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a1P31648 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.87□□□□□ -0.03
Slc6a1P31648 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a1P31648 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a1P31648 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms