Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.23■□□□□ 0.19
IghmP01872 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.23■□□□□ 0.19
IghmP01872 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IghmP01872 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IghmP01872 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
IghmP01872 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.22■□□□□ 0.19
IghmP01872 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.22■□□□□ 0.19
IghmP01872 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.22■□□□□ 0.19
IghmP01872 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.22■□□□□ 0.19
IghmP01872 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IghmP01872 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.22■□□□□ 0.19
IghmP01872 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
IghmP01872 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.21■□□□□ 0.19
IghmP01872 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
IghmP01872 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
IghmP01872 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.21■□□□□ 0.19
IghmP01872 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Gm37292-201ENSMUST00000192062 758 ntBASIC16.21■□□□□ 0.19
IghmP01872 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.21■□□□□ 0.19
IghmP01872 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
IghmP01872 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
IghmP01872 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IghmP01872 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
IghmP01872 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
IghmP01872 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
IghmP01872 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
IghmP01872 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.2■□□□□ 0.18
IghmP01872 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
IghmP01872 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IghmP01872 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IghmP01872 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.2■□□□□ 0.18
IghmP01872 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IghmP01872 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
IghmP01872 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.2■□□□□ 0.18
IghmP01872 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.2■□□□□ 0.18
IghmP01872 Gm4974-201ENSMUST00000209974 875 ntBASIC16.2■□□□□ 0.18
IghmP01872 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IghmP01872 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IghmP01872 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
IghmP01872 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IghmP01872 Haglr-201ENSMUST00000100000 2085 ntBASIC16.2■□□□□ 0.18
IghmP01872 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IghmP01872 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IghmP01872 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Gm13216-201ENSMUST00000117145 591 ntBASIC16.19■□□□□ 0.18
IghmP01872 Gm12441-201ENSMUST00000121806 588 ntBASIC16.19■□□□□ 0.18
IghmP01872 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.19■□□□□ 0.18
IghmP01872 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IghmP01872 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.18■□□□□ 0.18
IghmP01872 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IghmP01872 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
IghmP01872 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
IghmP01872 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms