Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.69□□□□□ -0.38
TcraP01849 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
TcraP01849 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
TcraP01849 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TcraP01849 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TcraP01849 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
TcraP01849 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TcraP01849 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TcraP01849 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Gm26833-201ENSMUST00000180899 440 ntBASIC12.68□□□□□ -0.38
TcraP01849 Gm45417-201ENSMUST00000209533 758 ntBASIC12.68□□□□□ -0.38
TcraP01849 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.68□□□□□ -0.38
TcraP01849 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.68□□□□□ -0.38
TcraP01849 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
TcraP01849 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TcraP01849 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TcraP01849 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TcraP01849 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TcraP01849 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TcraP01849 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.66□□□□□ -0.38
TcraP01849 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.66□□□□□ -0.38
TcraP01849 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TcraP01849 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TcraP01849 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TcraP01849 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.66□□□□□ -0.38
TcraP01849 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TcraP01849 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.66□□□□□ -0.38
TcraP01849 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TcraP01849 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.65□□□□□ -0.38
TcraP01849 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
TcraP01849 Gm40848-201ENSMUST00000221998 324 ntBASIC12.65□□□□□ -0.38
TcraP01849 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TcraP01849 Gm6139-201ENSMUST00000079261 882 ntBASIC12.65□□□□□ -0.38
TcraP01849 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TcraP01849 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms