Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.64□□□□□ -0.07
Ifna1P01572 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Gm29791-202ENSMUST00000207888 369 ntBASIC14.64□□□□□ -0.07
Ifna1P01572 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.64□□□□□ -0.07
Ifna1P01572 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.63□□□□□ -0.07
Ifna1P01572 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Gm7514-201ENSMUST00000209475 934 ntBASIC14.63□□□□□ -0.07
Ifna1P01572 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ifna1P01572 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ifna1P01572 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ifna1P01572 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ifna1P01572 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ifna1P01572 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.62□□□□□ -0.07
Ifna1P01572 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ifna1P01572 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.62□□□□□ -0.07
Ifna1P01572 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.62□□□□□ -0.07
Ifna1P01572 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.62□□□□□ -0.07
Ifna1P01572 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.62□□□□□ -0.07
Ifna1P01572 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Ifna1P01572 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ifna1P01572 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ifna1P01572 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.61□□□□□ -0.07
Ifna1P01572 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.61□□□□□ -0.07
Ifna1P01572 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Haglr-201ENSMUST00000100000 2085 ntBASIC14.61□□□□□ -0.07
Ifna1P01572 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ifna1P01572 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.61□□□□□ -0.07
Ifna1P01572 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.61□□□□□ -0.07
Ifna1P01572 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ifna1P01572 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ifna1P01572 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.61□□□□□ -0.07
Ifna1P01572 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ifna1P01572 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ifna1P01572 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ifna1P01572 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.6□□□□□ -0.07
Ifna1P01572 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.6□□□□□ -0.07
Ifna1P01572 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Mir8112-201ENSMUST00000184382 131 ntBASIC14.6□□□□□ -0.07
Ifna1P01572 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ifna1P01572 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.6□□□□□ -0.07
Ifna1P01572 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ifna1P01572 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ifna1P01572 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ifna1P01572 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ifna1P01572 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms