Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp1O89090 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Sp1O89090 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sp1O89090 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.49■□□□□ 0.39
Sp1O89090 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.49■□□□□ 0.39
Sp1O89090 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp1O89090 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp1O89090 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp1O89090 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp1O89090 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sp1O89090 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp1O89090 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sp1O89090 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Sp1O89090 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.48■□□□□ 0.39
Sp1O89090 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.48■□□□□ 0.39
Sp1O89090 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sp1O89090 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Sp1O89090 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.48■□□□□ 0.39
Sp1O89090 Gm7213-201ENSMUST00000215977 950 ntBASIC17.48■□□□□ 0.39
Sp1O89090 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp1O89090 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp1O89090 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Sp1O89090 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp1O89090 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.47■□□□□ 0.39
Sp1O89090 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sp1O89090 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.47■□□□□ 0.39
Sp1O89090 Gm23634-201ENSMUST00000175071 91 ntBASIC17.47■□□□□ 0.39
Sp1O89090 Gm8969-201ENSMUST00000199694 526 ntBASIC17.47■□□□□ 0.39
Sp1O89090 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp1O89090 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.47■□□□□ 0.39
Sp1O89090 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.47■□□□□ 0.39
Sp1O89090 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sp1O89090 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp1O89090 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp1O89090 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp1O89090 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.47■□□□□ 0.39
Sp1O89090 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp1O89090 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp1O89090 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Sp1O89090 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sp1O89090 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp1O89090 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp1O89090 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Sp1O89090 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sp1O89090 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sp1O89090 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.46■□□□□ 0.39
Sp1O89090 Mir1668-201ENSMUST00000184114 107 ntBASIC17.46■□□□□ 0.39
Sp1O89090 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.46■□□□□ 0.39
Sp1O89090 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sp1O89090 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sp1O89090 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp1O89090 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sp1O89090 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp1O89090 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp1O89090 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sp1O89090 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sp1O89090 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp1O89090 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp1O89090 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sp1O89090 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sp1O89090 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.46■□□□□ 0.38
Sp1O89090 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sp1O89090 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sp1O89090 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.45■□□□□ 0.38
Sp1O89090 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Sp1O89090 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.45■□□□□ 0.38
Sp1O89090 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sp1O89090 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
Sp1O89090 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sp1O89090 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Sp1O89090 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sp1O89090 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.45■□□□□ 0.38
Sp1O89090 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sp1O89090 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.44■□□□□ 0.38
Sp1O89090 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms