Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
CopeO89079 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.9■□□□□ 0.46
CopeO89079 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CopeO89079 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.9■□□□□ 0.46
CopeO89079 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.89■□□□□ 0.46
CopeO89079 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CopeO89079 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CopeO89079 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CopeO89079 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CopeO89079 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CopeO89079 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Haglr-201ENSMUST00000100000 2085 ntBASIC17.88■□□□□ 0.45
CopeO89079 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.88■□□□□ 0.45
CopeO89079 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.88■□□□□ 0.45
CopeO89079 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CopeO89079 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CopeO89079 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.88■□□□□ 0.45
CopeO89079 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CopeO89079 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.88■□□□□ 0.45
CopeO89079 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CopeO89079 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.87■□□□□ 0.45
CopeO89079 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.87■□□□□ 0.45
CopeO89079 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Gm7290-201ENSMUST00000104990 617 ntBASIC17.87■□□□□ 0.45
CopeO89079 Gm12918-201ENSMUST00000120234 636 ntBASIC17.87■□□□□ 0.45
CopeO89079 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.87■□□□□ 0.45
CopeO89079 Gm15710-201ENSMUST00000121821 636 ntBASIC17.87■□□□□ 0.45
CopeO89079 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.87■□□□□ 0.45
CopeO89079 Gm5075-201ENSMUST00000196916 622 ntBASIC17.87■□□□□ 0.45
CopeO89079 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.87■□□□□ 0.45
CopeO89079 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.87■□□□□ 0.45
CopeO89079 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.87■□□□□ 0.45
CopeO89079 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CopeO89079 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Flg-201ENSMUST00000050758 1488 ntBASIC17.87■□□□□ 0.45
CopeO89079 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CopeO89079 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CopeO89079 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CopeO89079 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.86■□□□□ 0.45
CopeO89079 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
CopeO89079 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CopeO89079 Gm6211-202ENSMUST00000167849 925 ntBASIC17.86■□□□□ 0.45
CopeO89079 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CopeO89079 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CopeO89079 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CopeO89079 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CopeO89079 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CopeO89079 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.85■□□□□ 0.45
CopeO89079 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CopeO89079 Gm44549-201ENSMUST00000208351 577 ntBASIC17.85■□□□□ 0.45
CopeO89079 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CopeO89079 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CopeO89079 Gm5874-201ENSMUST00000096101 508 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms