Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Abcd4O89016 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Abcd4O89016 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Abcd4O89016 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abcd4O89016 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abcd4O89016 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abcd4O89016 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abcd4O89016 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.67■□□□□ 0.1
Abcd4O89016 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abcd4O89016 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abcd4O89016 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abcd4O89016 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Abcd4O89016 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.67■□□□□ 0.1
Abcd4O89016 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abcd4O89016 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Abcd4O89016 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Abcd4O89016 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Abcd4O89016 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Abcd4O89016 Gm3375-201ENSMUST00000203929 796 ntBASIC15.66■□□□□ 0.1
Abcd4O89016 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.66■□□□□ 0.1
Abcd4O89016 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.66■□□□□ 0.1
Abcd4O89016 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Abcd4O89016 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Abcd4O89016 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Abcd4O89016 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.65■□□□□ 0.1
Abcd4O89016 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Abcd4O89016 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.65■□□□□ 0.1
Abcd4O89016 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.65■□□□□ 0.1
Abcd4O89016 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Abcd4O89016 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.65■□□□□ 0.1
Abcd4O89016 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.65■□□□□ 0.1
Abcd4O89016 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Abcd4O89016 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.64■□□□□ 0.09
Abcd4O89016 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.64■□□□□ 0.09
Abcd4O89016 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Abcd4O89016 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Abcd4O89016 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Abcd4O89016 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Abcd4O89016 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.63■□□□□ 0.09
Abcd4O89016 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Abcd4O89016 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Abcd4O89016 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Gm10418-201ENSMUST00000100943 576 ntBASIC15.63■□□□□ 0.09
Abcd4O89016 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.63■□□□□ 0.09
Abcd4O89016 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms