Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cldn1O88551 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cldn1O88551 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cldn1O88551 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Cldn1O88551 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.81□□□□□ -0.04
Cldn1O88551 Gm29518-201ENSMUST00000190858 372 ntBASIC14.81□□□□□ -0.04
Cldn1O88551 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Gm21559-201ENSMUST00000220638 855 ntBASIC14.81□□□□□ -0.04
Cldn1O88551 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Gm8587-201ENSMUST00000076538 843 ntBASIC14.81□□□□□ -0.04
Cldn1O88551 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cldn1O88551 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cldn1O88551 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cldn1O88551 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cldn1O88551 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.8□□□□□ -0.04
Cldn1O88551 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cldn1O88551 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.8□□□□□ -0.04
Cldn1O88551 Gm18669-201ENSMUST00000216049 778 ntBASIC14.8□□□□□ -0.04
Cldn1O88551 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.8□□□□□ -0.04
Cldn1O88551 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cldn1O88551 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cldn1O88551 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.79□□□□□ -0.04
Cldn1O88551 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.79□□□□□ -0.04
Cldn1O88551 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.79□□□□□ -0.04
Cldn1O88551 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cldn1O88551 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.79□□□□□ -0.04
Cldn1O88551 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn1O88551 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cldn1O88551 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn1O88551 Gm17808-201ENSMUST00000200859 894 ntBASIC14.78□□□□□ -0.04
Cldn1O88551 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms