Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1hO88427 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1hO88427 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1hO88427 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1hO88427 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1hO88427 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1hO88427 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.87■□□□□ 0.29
Cacna1hO88427 Chchd1-203ENSMUST00000224633 557 ntBASIC16.87■□□□□ 0.29
Cacna1hO88427 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1hO88427 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1hO88427 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Cacna1hO88427 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1hO88427 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cacna1hO88427 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1hO88427 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1hO88427 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1hO88427 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1hO88427 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1hO88427 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.86■□□□□ 0.29
Cacna1hO88427 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cacna1hO88427 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.86■□□□□ 0.29
Cacna1hO88427 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.86■□□□□ 0.29
Cacna1hO88427 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1hO88427 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1hO88427 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1hO88427 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1hO88427 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1hO88427 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.85■□□□□ 0.29
Cacna1hO88427 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.85■□□□□ 0.29
Cacna1hO88427 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.85■□□□□ 0.29
Cacna1hO88427 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1hO88427 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1hO88427 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cacna1hO88427 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.85■□□□□ 0.29
Cacna1hO88427 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1hO88427 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cacna1hO88427 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1hO88427 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1hO88427 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.85■□□□□ 0.29
Cacna1hO88427 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cacna1hO88427 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cacna1hO88427 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1hO88427 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.84■□□□□ 0.29
Cacna1hO88427 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.84■□□□□ 0.29
Cacna1hO88427 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cacna1hO88427 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cacna1hO88427 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cacna1hO88427 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Cacna1hO88427 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cacna1hO88427 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 Gm12260-201ENSMUST00000122447 411 ntBASIC16.83■□□□□ 0.28
Cacna1hO88427 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Cacna1hO88427 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.83■□□□□ 0.28
Cacna1hO88427 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1hO88427 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.82■□□□□ 0.28
Cacna1hO88427 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cacna1hO88427 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1hO88427 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cacna1hO88427 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.82■□□□□ 0.28
Cacna1hO88427 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1hO88427 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.82■□□□□ 0.28
Cacna1hO88427 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.82■□□□□ 0.28
Cacna1hO88427 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1hO88427 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1hO88427 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1hO88427 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1hO88427 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1hO88427 Gm7230-201ENSMUST00000173026 815 ntBASIC16.81■□□□□ 0.28
Cacna1hO88427 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.81■□□□□ 0.28
Cacna1hO88427 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.81■□□□□ 0.28
Cacna1hO88427 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms